Publications

Barupal DK, et al. Prioritizing cancer hazard assessments for IARC Monographs using an integrated approach of database fusion and text mining. Environ Int. 2021 Nov;156:106624. doi: 10.1016/j.envint.2021.106624. Epub 2021 May 10. PMID: 33984576; PMCID: PMC8380673.

Melki PN, et al. Experimental investigations of carcinogen-induced mutation spectra: Innovation, challenges and future directions. Mutat Res Genet Toxicol Environ Mutagen. 2020 May;853:503195. doi: 10.1016/j.mrgentox.2020.503195. Epub 2020 Apr 24. PMID: 32522347.

Hölzl-Armstrong L, et al. Characterising mutational spectra of carcinogens in the tumour suppressor gene TP53 using human TP53 knock-in (Hupki) mouse embryo fibroblasts. Methods Protoc. 2019 Nov 13;2(4):85. doi: 10.3390/mps2040085. PMID: 31766274; PMCID: PMC6961128.

Zhivagui M, et al. Experimental and pan-cancer genome analyses reveal widespread contribution of acrylamide exposure to carcinogenesis in humans. Genome Res. 2019 Apr;29(4):521-531. doi: 10.1101/gr.242453.118. Epub 2019 Mar 7. PMID: 30846532; PMCID: PMC6442384.

Huang MN, et al. Genome-scale mutational signatures of aflatoxin in cells, mice, and human tumors. Genome Res. 2017 Sep;27(9):1475-1486. doi: 10.1101/gr.220038.116. Epub 2017 Jul 24. PMID: 28739859; PMCID: PMC5580708.

Zhivagui M, et al. Modelling mutation spectra of human carcinogens using experimental systems. Basic Clin Pharmacol Toxicol. 2017 Sep;121(Suppl 3):16-22. doi: 10.1111/bcpt.12690. Epub 2017 Feb 3. PMID: 27754614.

Olivier M, et al. Modelling mutational landscapes of human cancers in vitro. Sci Rep. 2014 Mar 27;4:4482. doi: 10.1038/srep04482. Erratum in: Sci Rep. 2017 Jan 16;7:40898. PMID: 24670820; PMCID: PMC5259794.

Hollstein M, et al. Base changes in tumour DNA have the power to reveal the causes and evolution of cancer. Oncogene. 2017 Jan 12;36(2):158-167. doi: 10.1038/onc.2016.192. Epub 2016 Jun 6. PMID: 27270430; PMCID: PMC5241425.

Ardin M, et al. MutSpec: a Galaxy toolbox for streamlined analyses of somatic mutation spectra in human and mouse cancer genomes. BMC Bioinformatics. 2016 Apr 18;17:170. doi: 10.1186/s12859-016-1011-z. PMID: 27091472; PMCID: PMC4835840.